Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3438
Parameters: 2 7 7 80 10 50 1000
Length:  47984

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11424--11843
46
9.6
43
73
11
173
30
20
22
25
1.98
11559--11848
87
3.3
86
73
11
284
30
20
23
26
1.98
11515--11893
174
2.2
174
89
2
575
30
20
23
26
1.98
11469--11804
46
7.6
45
77
12
238
30
21
22
25
1.99
13103--13197
3
31.3
3
78
6
93
30
7
2
60
1.36
13333--13401
36
2.0
34
83
11
86
36
7
1
55
1.37
13504--13534
14
2.2
14
94
0
53
16
0
0
83
0.64
18062--18094
16
2.1
15
94
5
57
36
27
12
24
1.91
24590--24643
23
2.4
22
84
9
72
27
22
11
38
1.88
25931--25974
16
2.8
16
79
3
54
4
15
2
77
1.04
29782--29895
39
2.9
39
90
0
174
16
17
30
35
1.92
33783--33848
11
5.6
11
70
12
51
68
0
3
28
1.05
33962--34016
23
2.5
22
77
11
60
58
1
7
32
1.36
36156--36853
44
16.3
41
69
13
259
28
22
19
30
1.98
36064--36316
128
2.0
124
87
6
366
28
22
17
31
1.97
36336--36439
41
2.6
40
74
17
99
31
24
17
26
1.97
36158--36836
170
3.9
171
91
2
972
28
21
19
30
1.98
36839--37003
88
1.9
88
84
3
226
26
24
23
25
2.00

Tables:   1

The End!