Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1543
Parameters: 2 7 7 80 10 50 1000
Length:  21996

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7533--7557
8
3.1
8
100
0
50
24
12
28
36
1.91
12229--12294
24
2.8
22
78
13
69
54
1
1
42
1.18
13181--13229
18
2.7
18
93
0
80
36
0
8
55
1.30
13183--13230
3
16.0
3
82
0
60
35
0
6
58
1.23
13183--13230
12
4.0
12
91
0
69
35
0
6
58
1.23
13371--13442
24
2.9
24
78
15
67
44
0
22
33
1.53
13586--13681
39
2.5
39
80
6
108
20
23
28
27
1.99
19667--19744
28
2.7
29
74
9
70
53
1
2
42
1.22
19678--19745
31
2.3
28
78
9
73
54
1
2
41
1.24
20616--20658
18
2.4
18
92
0
68
37
0
9
53
1.33
20618--20662
3
15.0
3
80
0
54
35
0
6
57
1.25
20801--20871
24
2.9
24
78
14
65
43
0
22
33
1.54
21015--21110
39
2.5
39
80
6
108
20
23
28
27
1.99

Tables:   1

The End!