Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3677
Parameters: 2 7 7 80 10 50 1000
Length:  27800

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
409--439
15
2.1
15
94
5
55
38
9
19
32
1.84
6236--6277
14
2.9
14
85
7
57
78
0
4
16
0.91
6238--6282
20
2.2
21
88
4
65
80
0
4
15
0.87
9969--10004
14
2.6
14
95
4
65
55
13
0
30
1.39
12154--12184
11
2.7
12
90
10
55
61
0
0
38
0.96
12386--12451
30
2.2
30
94
0
114
27
36
22
13
1.92
16368--16514
40
3.7
40
83
5
120
25
27
21
25
2.00
16414--16594
80
2.3
80
83
9
219
27
27
20
23
1.99
16411--16594
40
4.6
40
81
7
196
28
27
20
23
1.99
25306--25478
59
2.9
59
84
3
197
24
26
12
36
1.91
25312--25478
29
5.7
28
72
12
129
23
26
12
37
1.91
25312--25500
29
6.4
29
70
11
125
23
25
12
37
1.91
25346--25515
89
1.9
91
81
4
211
22
24
13
38
1.91

Tables:   1

The End!