Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2226
Parameters: 2 7 7 80 10 50 1000
Length:  38869

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
665--724
27
2.3
26
85
2
75
35
20
23
21
1.96
762--811
25
2.0
26
84
4
66
34
22
28
16
1.95
8111--8173
32
2.0
32
83
0
81
36
20
22
20
1.95
8189--8240
27
2.0
26
84
3
68
34
21
26
17
1.95
8893--9007
54
2.1
54
88
0
176
24
19
20
36
1.95
8893--9011
27
4.4
27
83
0
148
24
20
19
36
1.95
15453--15512
30
2.0
30
87
6
86
26
25
10
38
1.87
20483--20614
39
3.4
39
84
6
171
29
4
19
46
1.70
22920--22954
10
3.5
10
88
11
54
68
0
0
31
0.90
22920--22971
9
5.8
9
82
13
63
65
0
1
32
1.04
22932--22979
25
1.9
25
83
8
62
66
2
2
29
1.14
25009--25050
22
1.9
22
85
0
57
50
0
4
45
1.23
29612--29645
18
1.9
18
88
5
52
14
26
44
14
1.84
29761--29975
27
8.0
27
85
3
254
26
14
21
37
1.92
32790--32972
43
4.3
43
90
1
269
23
31
22
22
1.98
32790--32972
85
2.1
86
88
1
278
23
31
22
22
1.98
34009--34280
138
2.0
138
93
1
465
48
14
9
27
1.75
35899--35941
15
2.9
15
82
10
61
23
0
2
74
0.93
35899--35941
7
5.9
7
84
10
50
23
0
2
74
0.93
36532--36573
14
3.0
15
83
13
54
47
30
0
21
1.51
36598--36623
7
3.7
7
100
0
52
46
38
0
15
1.46
36776--36816
14
2.9
14
85
3
55
29
51
2
17
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38186--38503
170
1.9
168
85
7
448
32
23
14
29
1.94
38457--38531
28
2.7
27
85
10
98
28
29
16
26
1.96

Tables:   1

The End!