Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold558
Parameters: 2 7 7 80 10 50 1000
Length:  24030

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1073--1130
30
1.9
30
89
0
89
41
3
24
31
1.71
1342--1373
13
2.5
13
94
0
55
31
0
12
56
1.37
1468--1709
50
4.7
50
86
4
297
26
24
29
19
1.99
1468--1717
100
2.4
103
88
6
364
26
24
29
20
1.99
7300--7333
17
2.0
17
94
0
59
52
2
5
38
1.41
9029--9097
27
2.6
27
95
2
122
14
7
42
36
1.73
9382--9942
87
6.4
86
68
12
255
27
22
19
31
1.97
9783--10067
44
6.7
44
71
9
135
25
21
21
30
1.98
9820--10111
46
6.8
42
73
12
186
26
20
20
31
1.98
9815--10111
44
6.8
45
73
11
221
26
21
20
31
1.98
22841--22881
3
13.7
3
90
10
66
68
0
2
29
1.03

Tables:   1

The End!