Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Gbar_D05 Parameters: 2 7 7 80 10 50 1000 Length: 63323194

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   

This is table  11  of  199  ( 23841 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4508879--4508912
16
2.1
16
100
0
68
26
20
11
41
1.87
4508961--4509021
30
2.0
30
100
0
122
54
26
3
16
1.58
4509768--4509801
16
2.1
16
94
0
59
23
20
8
47
1.78
4520705--4520745
20
2.1
20
86
4
57
41
4
17
36
1.71
4523157--4523197
19
2.2
19
100
0
82
12
26
31
29
1.92
4531414--4531488
9
8.4
9
80
11
84
42
24
10
22
1.85
4531422--4531488
18
3.7
18
86
9
93
41
23
11
22
1.87
4531526--4531554
12
2.3
13
94
5
51
17
0
17
65
1.27
4533917--4533941
7
3.6
7
100
0
50
0
12
0
88
0.53
4562029--4562058
12
2.5
12
88
0
51
16
23
60
0
1.36
4571341--4571385
13
3.5
13
81
3
56
53
0
0
46
1.00
4576388--4576450
27
2.3
28
88
2
101
39
9
0
50
1.35
4576849--4576951
37
2.8
37
93
0
170
48
0
10
40
1.38
4576872--4576935
18
3.5
18
78
4
74
46
0
10
42
1.39
4576856--4576951
19
5.2
19
76
9
108
50
0
11
38
1.39
4577027--4577122
19
5.2
19
79
5
115
50
0
9
40
1.35
4577027--4577122
37
2.6
37
93
0
165
50
0
9
40
1.35
4576769--4577137
171
2.2
168
91
2
587
45
4
7
42
1.51
4577027--4577114
18
4.8
18
80
4
104
50
0
10
39
1.37
4577676--4577735
27
2.2
27
84
0
84
15
28
26
30
1.96
4577781--4577844
27
2.4
27
94
0
110
48
0
9
42
1.35
4583947--4583984
20
2.0
20
94
5
69
63
0
0
36
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4591934--4591976
21
2.0
21
81
0
50
23
11
0
65
1.25
4592524--4592555
14
2.3
14
100
0
64
31
46
15
6
1.71
4597656--4597687
14
2.3
14
100
0
64
31
46
15
6
1.71
4615347--4615502
43
3.7
43
84
1
181
28
26
15
30
1.96
4622854--4623087
21
11.3
21
73
10
169
17
21
16
44
1.86
4622854--4623087
42
5.7
42
75
6
226
17
21
16
44
1.86
4622871--4623075
61
3.3
61
86
1
284
18
21
16
44
1.87
4623145--4623368
112
2.0
112
98
0
430
35
5
15
42
1.71
4623376--4623420
21
2.2
20
84
4
54
37
8
31
22
1.85
4625487--4625595
42
2.6
42
73
13
107
15
23
16
44
1.86
4626717--4626785
16
4.2
16
94
3
120
26
0
36
37
1.57
4626717--4626785
33
2.1
32
94
2
120
26
0
36
37
1.57
4626766--4626856
45
2.0
45
85
2
121
27
6
28
37
1.82
4627021--4627055
18
2.0
17
88
5
52
54
0
0
45
0.99
4627445--4627472
6
4.7
6
100
0
56
17
50
14
17
1.79
4641354--4641386
15
2.3
15
89
5
50
48
3
0
48
1.17
4654110--4654136
2
13.5
2
100
0
54
51
0
48
0
1.00
4655270--4655302
11
2.8
12
86
9
50
48
0
0
51
1.00
4655654--4655679
13
2.0
13
100
0
52
15
30
15
38
1.88
4655783--4655808
13
2.0
13
100
0
52
15
30
15
38
1.88
4655650--4655907
129
2.0
129
100
0
516
27
16
19
37
1.93
4662631--4662690
30
2.0
30
100
0
120
26
10
16
46
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4667504--4667550
9
5.2
9
81
0
58
2
44
2
51
1.25
4667503--4667553
24
2.1
24
88
0
75
1
47
1
49
1.24
4667556--4667598
12
3.6
12
87
0
59
18
37
11
32
1.87
4667570--4667604
15
2.3
15
95
0
61
14
40
11
34
1.82
4667678--4667717
21
1.9
21
85
10
55
15
32
7
45
1.74
4672776--4672960
93
2.0
94
94
3
331
39
20
9
30
1.84
4677650--4677685
18
2.0
17
89
10
54
52
0
0
47
1.00
4696346--4696387
3
14.0
3
100
0
84
66
0
0
33
0.92
4700777--4700826
16
3.1
16
80
8
57
50
40
2
8
1.43
4701915--4701948
3
11.3
3
100
0
68
32
0
0
67
0.91
4704875--4704919
16
2.8
16
86
3
54
28
2
2
66
1.15
4706729--4706785
17
3.4
17
82
4
62
49
1
5
43
1.35
4706802--4706853
18
2.8
17
77
13
50
48
3
1
46
1.31
4707130--4707182
27
2.0
27
85
7
72
18
7
13
60
1.56
4708843--4708882
20
2.1
19
90
4
62
25
7
20
47
1.75
4711750--4711783
3
11.3
3
100
0
68
32
0
0
67
0.91
4714605--4714656
24
2.2
24
89
0
77
50
9
3
36
1.54
4719020--4719072
24
2.2
24
89
0
79
49
9
3
37
1.53
4720906--4720932
11
2.5
11
100
0
54
40
0
0
59
0.98
4720881--4720928
19
2.5
20
70
10
55
45
0
2
52
1.12
4724228--4724286
31
1.9
31
89
0
91
25
20
1
52
1.56
4724376--4724441
22
3.0
22
81
0
87
36
19
27
16
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4724422--4724493
26
2.8
25
85
4
99
34
22
26
16
1.95
4724643--4724668
13
2.0
13
100
0
52
46
7
0
46
1.31
4725461--4725503
8
5.2
8
83
5
59
58
2
0
39
1.11
4725457--4725491
16
2.1
17
89
5
54
57
2
0
40
1.14
4726152--4726185
8
4.4
8
85
7
52
14
0
47
38
1.45
4726152--4726185
15
2.2
16
89
5
52
14
0
47
38
1.45
4726026--4726765
302
2.5
297
82
9
876
27
2
27
42
1.68
4729209--4729264
23
2.5
22
77
8
58
39
1
1
57
1.20
4729328--4729470
43
3.3
42
81
8
146
28
17
23
30
1.97
4730730--4730773
22
2.0
22
95
0
79
27
11
9
52
1.67
4733138--4733167
6
5.0
6
100
0
60
0
33
0
66
0.92
4745347--4745437
45
2.0
45
100
0
182
23
15
19
41
1.89
4749280--4749307
4
7.0
4
100
0
56
0
75
0
25
0.81
4751174--4751206
2
17.0
2
93
6
59
0
48
0
51
1.00
4760261--4760529
46
5.6
46
90
5
376
34
14
22
28
1.94
4760261--4760566
98
3.3
92
82
14
369
35
15
21
27
1.93
4760321--4760529
52
4.1
51
86
9
302
35
14
22
27
1.93
4760493--4760638
37
4.0
37
92
1
233
36
16
21
25
1.94
4761894--4762135
49
4.9
49
95
0
412
23
15
30
30
1.95
4765319--4765619
46
6.5
44
85
9
325
34
13
21
29
1.92
4765260--4765619
98
3.8
94
83
10
464
34
13
21
30
1.92
4765260--4765608
143
2.4
144
95
0
628
34
14
21
30
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4765583--4765691
37
3.0
37
90
2
177
35
16
22
24
1.95
4767787--4767891
37
2.9
37
91
2
169
24
21
17
36
1.95
4767855--4768215
46
7.6
46
86
7
470
30
21
13
34
1.92
4767855--4768215
98
3.8
95
86
6
443
30
21
13
34
1.92
4767866--4768215
144
2.4
144
95
0
637
30
21
13
34
1.92
4768867--4769224
178
2.0
179
98
0
691
36
19
9
35
1.84
4771678--4771726
23
2.0
24
85
14
66
40
2
8
48
1.44
4789112--4789304
96
2.0
96
91
0
314
33
16
24
26
1.96
4808463--4808498
8
4.3
9
83
16
51
47
22
8
22
1.77
4812114--4812157
12
3.7
12
84
0
52
20
9
68
2
1.28
4812120--4812158
15
2.6
15
83
0
51
20
10
66
2
1.33
4815673--4815712
22
1.9
21
85
10
55
25
15
37
22
1.93
4818183--4818211
5
5.8
5
100
0
58
41
0
0
58
0.98
4818241--4818282
18
2.5
17
81
11
50
59
7
30
2
1.37
4818279--4818309
6
5.2
6
92
0
53
80
0
19
0
0.71
4818972--4819018
24
2.0
24
84
16
62
31
0
17
51
1.46
4819175--4819268
41
2.4
40
80
7
104
23
18
27
30
1.97
4819980--4820020
21
1.9
22
90
5
66
46
17
0
36
1.48
4822339--4822365
13
2.1
13
100
0
54
37
0
14
48
1.45
4824314--4824383
31
2.3
31
100
0
140
5
30
11
52
1.60
4841725--4841766
18
2.5
17
81
11
50
38
0
2
59
1.10
4842810--4842882
38
1.9
38
97
0
137
53
23
2
20
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4857158--4857190
15
2.1
16
94
5
59
18
18
0
63
1.31
4859295--4859327
17
1.9
18
88
11
52
36
9
0
54
1.32
4862322--4862350
7
4.1
7
100
0
58
13
0
0
86
0.58
4862820--4862913
45
2.1
45
91
0
152
26
6
10
56
1.57
4863538--4863572
18
1.9
18
88
0
52
45
0
2
51
1.16
4863850--4863931
36
2.3
36
81
8
87
63
4
3
28
1.32
4875174--4875206
5
6.8
5
93
6
59
39
21
21
18
1.93
4877965--4877992
6
4.7
6
100
0
56
82
0
0
17
0.68
4882848--4882982
18
8.0
17
70
19
95
40
0
1
57
1.13
4882863--4882921
26
2.3
25
85
8
82
40
0
1
57
1.09

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199