Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold280
Parameters: 2 7 7 80 10 50 1000
Length:  39800

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
545--766
40
5.6
40
85
8
242
27
21
26
25
2.00
5129--5230
26
3.9
26
92
0
168
36
24
7
31
1.84
22139--22224
43
2.0
43
82
8
104
26
26
19
26
1.99
25693--26288
47
12.5
47
93
1
976
32
8
29
29
1.87
26407--26485
37
2.1
37
85
0
104
24
20
30
25
1.98
30247--30506
40
6.6
40
84
4
280
25
27
21
25
1.99
30247--30506
79
3.3
78
83
5
285
25
27
21
25
1.99
30438--30515
40
1.9
41
82
10
97
26
28
20
24
1.99
37899--38091
40
4.8
39
81
6
183
25
28
20
24
1.99
37905--38091
80
2.3
81
80
8
204
25
28
21
25
1.99
38023--38100
40
1.9
41
82
10
97
26
28
20
24
1.99

Tables:   1

The End!