Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold787
Parameters: 2 7 7 80 10 50 1000
Length:  91927

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2538--2566
14
2.1
14
100
0
58
27
13
6
51
1.66
6724--6792
21
3.3
21
87
2
95
11
24
8
55
1.64
9152--9245
18
5.4
18
92
3
131
28
9
25
36
1.87
17501--17528
14
2.0
14
100
0
56
14
14
0
71
1.15
17525--17598
6
13.2
6
78
18
72
33
1
17
47
1.56
17526--17602
11
7.5
11
79
15
94
33
1
18
46
1.57
17520--17598
30
2.6
30
83
13
99
32
2
16
48
1.60
17540--17601
5
12.0
5
76
17
56
33
1
17
46
1.58
17526--17602
20
3.8
21
83
16
108
33
1
18
46
1.57
25769--25830
32
1.9
32
96
0
115
38
22
9
29
1.86
33109--33136
13
2.2
13
100
0
56
28
7
14
50
1.69
43049--43092
21
2.1
21
83
8
54
25
9
2
63
1.35
45317--45360
22
2.0
22
100
0
88
18
22
4
54
1.61
49479--49540
32
1.9
32
96
0
115
29
9
22
38
1.86
57712--57785
6
13.2
6
76
21
72
47
17
1
33
1.56
57709--57770
5
12.0
5
76
17
56
46
17
1
33
1.58
57708--57784
11
7.5
11
79
15
94
46
18
1
33
1.57
57708--57784
20
3.8
21
83
16
108
46
18
1
33
1.57
57782--57809
14
2.0
14
100
0
56
71
0
14
14
1.15
66063--66156
18
5.4
18
92
3
131
36
25
9
28
1.87
66063--66143
9
9.0
9
70
0
54
34
27
9
28
1.89
68516--68604
21
4.1
21
84
5
90
53
10
23
12
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68516--68584
21
3.3
21
87
2
95
55
8
24
11
1.64
72741--72769
14
2.1
14
100
0
58
51
6
13
27
1.66

Tables:   1

The End!