Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold684
Parameters: 2 7 7 80 10 50 1000
Length:  42195

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6010--6058
25
2.0
25
95
0
89
12
24
32
30
1.92
6181--6232
27
1.9
27
92
0
86
15
23
32
28
1.95
13393--13490
44
2.2
46
79
18
118
14
23
2
60
1.45
14740--14773
14
2.4
14
90
5
50
2
11
2
82
0.89
14873--14897
10
2.5
10
100
0
50
8
0
8
84
0.79
21056--21107
26
2.0
26
92
0
86
28
34
21
15
1.94
21068--21216
70
2.1
71
90
2
230
30
28
16
23
1.96
21229--21275
24
2.0
24
95
0
85
31
34
21
12
1.91
21137--21352
99
2.1
102
88
5
323
32
31
18
18
1.95
21680--21743
30
2.2
29
81
10
76
29
28
6
35
1.82
21687--21743
30
1.9
30
85
3
80
29
24
7
38
1.82
28600--28651
26
2.0
26
92
0
86
28
34
21
15
1.94
28612--28762
72
2.1
71
91
2
241
30
29
16
23
1.96
28775--28825
26
2.0
26
96
0
93
29
35
23
11
1.90
28681--28903
103
2.2
104
92
2
369
31
31
18
17
1.95
29232--29295
30
2.2
29
81
10
76
29
28
6
35
1.82
29239--29295
30
1.9
30
85
3
80
29
24
7
38
1.82
38592--38651
20
3.1
19
77
13
68
25
28
11
35
1.91
39138--39175
20
1.9
19
89
5
58
23
26
15
34
1.95
41967--42029
20
3.2
19
78
10
65
71
0
22
6
1.08

Tables:   1

The End!