Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1369
Parameters: 2 7 7 80 10 50 1000
Length:  23401

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
274--325
21
2.4
23
78
21
67
46
7
19
26
1.77
7870--7916
20
2.3
20
85
0
67
21
12
36
29
1.91
14148--14201
20
2.7
20
82
0
63
24
20
18
37
1.94
14148--14221
30
2.5
30
86
8
98
21
20
18
39
1.93
14148--14212
20
3.2
20
71
16
53
23
21
16
38
1.93
16863--17002
6
22.3
6
65
8
64
69
2
20
8
1.25
16864--17002
18
7.7
18
72
8
104
69
2
20
8
1.26
16963--17000
13
2.8
13
82
17
51
73
0
18
7
1.06
16964--17014
21
2.4
21
74
6
50
74
1
17
5
1.11
17017--17079
33
1.9
33
84
12
85
55
6
25
12
1.60
18856--18909
20
2.7
20
82
0
63
24
20
18
37
1.94
18856--18929
30
2.5
30
86
8
98
21
20
18
39
1.93
18856--18920
20
3.2
20
71
16
53
23
21
16
38
1.93

Tables:   1

The End!