Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1982
Parameters: 2 7 7 80 10 50 1000
Length:  34914

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2628--2798
93
1.8
93
91
2
281
29
26
21
22
1.99
2623--2795
46
3.7
46
75
14
176
30
25
20
23
1.98
3217--3276
30
2.0
30
86
0
84
30
25
6
38
1.81
4912--5035
55
2.4
49
80
14
167
26
20
20
31
1.98
4923--5032
55
2.0
55
100
0
220
25
20
21
32
1.97
5092--5215
46
2.6
48
78
3
135
22
26
20
29
1.99
5092--5268
92
1.9
95
84
3
243
22
24
21
31
1.98
6441--6590
42
3.6
43
71
17
125
34
23
17
25
1.96
13379--13452
29
2.6
29
86
4
96
25
31
16
27
1.96
21130--21203
29
2.6
29
86
4
96
25
31
16
27
1.96
25289--25476
40
4.7
39
84
5
218
23
21
28
26
1.99
25289--25488
79
2.5
78
82
9
226
23
21
28
26
1.99
33296--33511
40
5.4
40
91
2
305
23
23
28
25
2.00
33296--33511
79
2.7
80
88
5
314
23
23
28
25
2.00

Tables:   1

The End!