Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2973
Parameters: 2 7 7 80 10 50 1000
Length:  49200

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5380--5499
23
5.1
23
92
2
186
30
20
20
28
1.98
5550--5616
20
3.3
20
93
0
116
32
20
11
34
1.90
5550--5605
11
5.5
11
71
16
57
32
19
12
35
1.89
15443--15597
42
3.7
42
81
3
168
30
25
16
28
1.96
20099--20137
20
2.0
20
85
10
53
74
0
2
23
0.94
24898--24980
41
2.0
41
95
0
148
32
15
24
27
1.95
28817--29185
48
7.8
47
74
15
246
26
18
29
24
1.98
28865--29185
92
3.4
95
75
11
268
26
18
29
24
1.98
35767--35991
48
4.7
47
76
7
146
27
20
28
24
1.99
39867--40044
27
6.6
27
82
3
187
29
27
15
27
1.96
39888--40043
82
1.9
81
85
3
215
28
27
16
27
1.97
47938--48114
27
6.6
27
82
4
187
28
27
15
27
1.96
47959--48113
82
1.9
80
85
5
213
28
27
16
27
1.97

Tables:   1

The End!