Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1714
Parameters: 2 7 7 80 10 50 1000
Length:  14385

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55--155
30
3.4
30
86
2
132
29
22
3
43
1.71
519--557
3
12.3
3
89
10
60
69
0
30
0
0.89
521--570
26
1.9
26
88
8
75
74
0
26
0
0.83
685--754
15
4.5
15
75
12
54
67
20
10
2
1.33
861--941
15
5.9
13
77
17
67
80
0
19
0
0.72
859--941
20
4.4
19
82
11
100
79
0
20
0
0.73
860--946
11
8.0
10
76
20
77
80
0
19
0
0.71
880--939
15
3.7
16
81
18
79
81
0
18
0
0.69
860--943
18
4.3
20
73
14
86
80
0
19
0
0.70
1474--1516
22
2.0
22
86
8
63
53
16
4
25
1.62
1533--1618
17
5.2
16
86
8
111
30
11
9
48
1.71
1512--1670
17
9.4
16
73
17
83
30
11
10
47
1.73
1531--1670
17
8.4
16
71
13
86
30
11
10
47
1.72
9794--9965
68
2.5
68
85
3
213
30
14
22
33
1.94
9856--10086
121
1.9
120
84
4
304
29
13
21
35
1.92
9982--10155
69
2.5
68
84
3
206
29
14
23
32
1.94
9794--10399
190
3.2
190
96
1
1130
29
13
21
35
1.92
10051--10277
122
1.9
122
84
3
305
30
14
21
34
1.92
10316--10518
54
3.5
54
69
17
174
28
14
20
36
1.92
10235--10553
120
2.6
121
92
3
516
27
14
21
37
1.91
10537--10570
16
2.1
17
88
5
52
17
11
5
64
1.45
10477--10874
179
2.2
176
86
7
545
27
17
18
37
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10463--10874
87
4.7
87
80
9
458
26
17
17
38
1.92
10818--11031
53
4.1
55
84
12
288
27
16
18
37
1.92
10826--11031
103
2.0
102
87
7
301
27
16
18
37
1.92
11967--12085
57
2.0
60
88
7
183
27
20
23
28
1.99
12317--12349
13
2.4
14
90
5
50
69
3
0
27
1.03
12345--12445
30
3.4
30
83
4
125
29
22
3
43
1.71
12704--12749
10
4.7
10
81
5
58
69
0
30
0
0.89
12707--12749
19
2.4
17
88
11
59
69
0
30
0
0.88
12816--12848
3
11.3
3
87
6
50
72
0
27
0
0.85
12818--12864
22
2.1
23
88
11
71
78
0
21
0
0.75
12816--12867
12
4.1
12
82
9
59
78
0
21
0
0.74
12974--13041
15
4.6
15
76
7
59
67
20
10
1
1.28
12971--13027
30
1.9
28
86
10
78
70
21
7
1
1.20
13157--13207
15
3.3
14
78
21
57
76
0
23
0
0.79
13173--13231
13
4.7
13
78
16
61
77
0
22
0
0.76
13163--13234
20
3.8
20
75
15
62
76
0
23
0
0.79
13192--13237
20
2.3
21
88
7
69
80
0
19
0
0.71
13771--13812
22
2.0
22
86
9
61
52
16
4
26
1.63
13808--13967
17
9.4
17
79
8
164
30
12
10
47
1.74
13929--14054
35
3.4
37
72
15
109
34
9
11
43
1.74

Tables:   1

The End!