Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold356
Parameters: 2 7 7 80 10 50 1000
Length:  38713

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6883--6960
29
2.7
28
84
11
104
25
15
30
28
1.96
11459--11489
16
1.9
16
93
0
53
51
25
6
16
1.68
12949--13067
29
4.2
29
78
10
129
30
11
29
28
1.92
17431--17508
29
2.7
29
75
9
79
29
16
32
21
1.96
19868--19911
22
2.0
22
90
0
70
38
6
11
43
1.67
20358--20408
22
2.3
21
75
21
50
23
1
27
47
1.63
26716--26750
7
5.0
7
92
0
61
28
0
45
25
1.54
26710--26750
14
2.9
14
88
0
64
31
0
43
24
1.54
28957--29238
40
7.1
40
80
8
224
23
23
27
25
2.00
28996--29218
80
2.8
80
85
0
313
23
24
26
25
2.00
37147--37355
40
5.2
40
94
1
339
23
23
27
24
2.00
37147--37355
79
2.6
79
91
0
337
23
23
27
24
2.00
37147--37378
119
1.9
119
86
3
333
23
23
27
25
2.00
37165--37388
40
5.7
40
89
3
163
24
24
27
24
2.00

Tables:   1

The End!