Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3053
Parameters: 2 7 7 80 10 50 1000
Length:  30479

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
925--1001
22
3.4
22
67
19
68
35
2
25
36
1.70
920--1015
46
2.1
46
100
0
192
34
2
22
40
1.66
5489--5565
22
3.4
22
70
19
77
35
3
27
33
1.75
5487--5576
46
2.0
45
97
2
171
35
3
25
35
1.73
6456--6514
30
2.0
30
93
0
100
61
10
1
27
1.38
14346--14451
40
2.7
39
82
7
108
25
27
20
26
1.99
14388--14517
40
3.3
40
85
4
183
29
27
19
23
1.98
17708--17947
133
1.8
131
81
10
301
32
16
24
26
1.96
17882--18249
44
8.3
44
87
3
481
32
14
24
27
1.95
17857--18268
132
3.1
130
83
6
469
31
14
24
29
1.95
18102--18410
89
3.5
85
83
6
291
30
16
26
26
1.97
18076--18422
44
7.9
44
79
8
282
31
16
25
26
1.97
18189--18410
89
2.6
85
86
5
304
30
18
27
24
1.98
18378--18581
80
2.6
79
79
1
221
31
18
24
25
1.97
20033--20099
21
3.4
20
78
8
57
40
4
0
55
1.20
20091--20130
13
3.0
14
82
17
50
35
2
0
62
1.09
25133--25424
27
10.9
27
80
3
313
28
22
8
40
1.83
25434--25627
27
7.2
27
85
3
257
36
17
19
26
1.94
25139--25438
106
2.8
104
83
7
252
28
21
9
40
1.84
25831--25906
27
2.8
27
86
4
100
21
21
19
38
1.94
26004--26055
22
2.4
22
80
0
59
21
25
21
32
1.98
26195--26261
27
2.6
25
78
19
66
17
20
22
38
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26212--26269
27
2.1
28
81
15
77
15
18
27
37
1.92
26410--26558
6
24.8
6
73
17
123
20
17
13
48
1.81
26410--26558
24
5.7
24
76
20
138
20
17
13
48
1.81
30318--30391
37
2.0
37
82
15
91
41
24
8
25
1.82

Tables:   1

The End!