Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2178
Parameters: 2 7 7 80 10 50 1000
Length:  78845

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6539--6585
24
2.0
24
95
0
85
38
8
6
46
1.60
8647--8698
26
2.0
26
96
0
95
40
11
5
42
1.65
9426--9490
34
2.0
34
84
6
89
27
26
20
26
1.99
9798--9846
25
2.0
26
84
8
66
24
16
20
38
1.92
11321--11376
26
2.2
26
96
0
103
37
26
5
30
1.79
15840--15889
26
1.9
26
95
0
91
38
14
2
46
1.56
17955--18004
26
1.9
26
95
0
91
38
14
2
46
1.56
20052--20101
26
1.9
26
95
0
91
38
14
2
46
1.56
29626--29847
46
4.8
46
83
3
275
21
21
28
28
1.98
29622--29847
93
2.4
94
87
3
307
21
21
29
27
1.99
33275--33318
19
2.4
18
85
7
54
40
9
0
50
1.34
36585--36634
26
1.9
26
95
0
91
38
14
2
46
1.56
38703--38752
26
1.9
26
95
0
91
38
12
6
44
1.66
40798--40847
26
1.9
26
95
0
91
38
14
2
46
1.56
42909--42960
26
2.0
26
96
0
95
40
11
5
42
1.65
45005--45054
26
1.9
26
91
0
82
36
14
4
46
1.63
47643--47757
28
4.1
27
81
10
126
18
23
21
36
1.95
52043--52092
26
1.9
26
91
0
82
38
12
2
48
1.52
58919--58968
26
1.9
26
95
0
91
38
14
2
46
1.56
61033--61082
26
1.9
26
95
0
91
38
14
2
46
1.56
63145--63194
26
1.9
26
95
0
91
38
14
2
46
1.56
65240--65291
26
2.0
26
96
0
95
40
11
5
42
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67326--67375
26
1.9
26
91
0
82
38
12
2
48
1.52
74195--74244
26
1.9
26
95
0
91
38
14
2
46
1.56
76292--76340
25
2.0
25
95
0
89
38
12
2
46
1.53
78399--78448
26
1.9
26
95
0
91
38
14
2
46
1.56

Tables:   1

The End!