Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold563
Parameters: 2 7 7 80 10 50 1000
Length:  19018

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1311--1493
48
3.7
47
78
7
204
28
26
19
25
1.99
1312--1498
99
1.9
100
94
1
331
28
26
20
25
1.99
1307--1500
49
3.9
49
79
4
219
27
26
19
25
1.99
3923--3987
15
4.4
15
78
16
73
63
13
13
9
1.53
3923--3991
30
2.3
31
83
14
92
60
17
13
8
1.56
6952--7139
49
3.8
49
82
2
250
28
27
18
26
1.98
6957--7144
100
1.9
100
95
0
340
28
27
19
25
1.99
9595--9648
15
3.7
15
75
20
51
61
18
12
7
1.54
12631--12776
49
2.9
49
81
4
168
26
26
20
26
1.99
16854--16923
28
2.5
28
88
9
99
31
27
14
27
1.95

Tables:   1

The End!