Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1042
Parameters: 2 7 7 80 10 50 1000
Length:  19902

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1588--1640
14
4.0
14
85
9
76
22
11
0
66
1.24
1678--1725
12
3.8
13
83
8
64
12
6
12
68
1.37
3364--3439
36
2.0
39
92
7
131
34
19
21
25
1.96
5881--5929
14
3.5
13
81
13
62
16
8
2
73
1.16
5881--5933
28
2.0
26
88
7
79
20
9
1
67
1.28
5972--6016
23
2.0
23
90
0
72
13
2
11
73
1.19
5972--6016
12
3.9
11
88
8
63
13
2
11
73
1.19
16969--17017
10
4.9
10
78
9
55
26
30
16
26
1.97
16969--17015
20
2.3
20
89
7
69
25
31
17
25
1.97

Tables:   1

The End!