Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold951
Parameters: 2 7 7 80 10 50 1000
Length:  40422

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4153--4337
40
4.7
40
82
6
216
25
26
22
25
2.00
4153--4337
79
2.3
81
83
7
227
25
26
22
25
2.00
4496--4732
47
5.0
47
87
2
294
33
9
29
27
1.89
4851--4929
37
2.1
37
90
0
122
24
18
31
25
1.98
6371--6669
47
6.3
47
93
0
490
32
8
29
29
1.87
23255--23345
30
3.2
30
62
23
77
20
27
8
42
1.82
23240--23354
56
2.1
56
96
0
212
18
26
9
46
1.79
24891--25004
27
4.2
27
90
2
113
32
25
7
34
1.85
24891--25068
54
3.3
54
84
3
207
32
24
7
35
1.83
24910--25060
27
5.6
27
89
1
216
31
23
7
38
1.82
24889--25085
81
2.4
80
81
5
234
34
23
7
35
1.82
25046--25124
27
2.9
27
82
0
95
43
21
6
29
1.77
28831--28979
27
5.6
27
79
6
144
30
22
6
39
1.80
28809--28987
54
3.3
54
77
7
186
33
24
6
35
1.81
28828--28979
53
2.8
54
80
7
193
30
23
7
38
1.82
28956--29041
27
3.2
27
80
9
95
41
24
6
26
1.80
28970--29087
27
4.4
28
78
10
93
42
18
11
27
1.85
32891--32930
13
3.1
13
100
0
80
15
32
37
15
1.88

Tables:   1

The End!