Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1301
Parameters: 2 7 7 80 10 50 1000
Length:  43546

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1863--1941
37
2.1
37
90
0
122
25
31
18
24
1.98
2060--2860
47
16.9
47
94
3
1376
29
29
8
32
1.87
2060--2860
96
8.5
94
95
2
1376
29
29
8
32
1.87
6029--6071
16
2.7
16
85
0
59
16
20
11
51
1.75
12148--12181
18
1.9
18
88
5
52
29
11
20
38
1.88
13221--13337
29
4.1
29
81
3
130
28
29
13
28
1.94
21740--21931
40
4.8
40
78
8
178
26
21
27
25
2.00
21793--21957
79
2.1
79
82
6
192
26
21
27
24
1.99
24225--24341
45
2.6
45
89
5
168
22
23
29
25
1.99
26557--26622
33
2.0
33
96
0
123
46
9
10
33
1.70
27296--27425
49
2.7
49
90
0
206
37
20
16
25
1.93
28184--28283
6
16.3
6
74
12
78
48
13
18
21
1.81
28195--28295
31
3.3
31
90
0
148
47
14
17
19
1.82
28239--28295
19
3.4
19
64
31
56
47
15
17
19
1.83
28443--28544
27
3.8
26
88
5
141
34
22
25
17
1.96
30497--30532
18
2.0
18
100
0
72
27
16
0
55
1.42
33241--33273
18
1.9
17
88
11
50
54
9
15
21
1.68
34850--34908
29
2.0
29
93
0
100
30
22
0
47
1.51
38701--38795
40
2.4
39
85
3
120
37
37
11
12
1.80

Tables:   1

The End!