Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2202
Parameters: 2 7 7 80 10 50 1000
Length:  31084

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4840--4891
25
2.1
25
89
3
79
25
19
21
34
1.96
7137--7169
10
3.3
10
100
0
66
90
0
9
0
0.44
8048--8082
18
1.9
18
88
11
54
57
0
20
22
1.41
15006--15043
1
38.0
1
100
0
76
100
0
0
0
0.00
17299--17352
23
2.2
25
78
15
60
62
3
22
11
1.43
22428--22453
13
2.0
13
100
0
52
23
15
0
61
1.33
22492--22535
11
4.0
11
82
11
54
13
4
9
72
1.24
22491--22532
12
3.6
12
87
12
61
11
2
7
78
1.04
25572--25611
18
2.2
18
86
4
53
12
27
0
60
1.33
26666--26719
13
3.9
14
86
11
76
24
11
0
64
1.25
26666--26714
14
3.4
14
88
2
71
20
8
0
71
1.11
26666--26714
15
3.4
15
91
5
75
20
8
0
71
1.11
26756--26795
11
3.6
11
86
6
55
15
5
7
72
1.24
26755--26796
12
3.7
12
81
18
54
14
4
7
73
1.21
26756--26798
22
2.0
22
90
9
70
16
4
9
69
1.31

Tables:   1

The End!