Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1557
Parameters: 2 7 7 80 10 50 1000
Length:  75183

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12076--12282
40
5.3
39
83
9
201
23
20
28
28
1.99
12079--12282
76
2.6
76
80
6
216
23
20
28
27
1.99
20188--20398
40
5.3
40
89
4
239
23
20
27
28
1.99
33874--33921
20
2.5
20
86
3
62
64
2
6
27
1.28
33916--33978
27
2.3
26
76
10
63
50
11
0
38
1.38
33945--33974
15
2.0
15
93
0
51
40
10
0
50
1.36
35517--35568
15
3.3
15
76
21
52
76
0
1
21
0.87
35517--35573
21
2.7
21
80
20
73
77
0
1
21
0.86
35529--35567
15
2.8
14
84
7
53
76
0
2
20
0.90
39290--39513
104
2.2
104
93
1
378
31
31
19
17
1.95
39842--39905
30
2.2
29
81
10
76
29
28
6
35
1.82
39849--39905
30
1.9
30
85
3
80
29
24
7
38
1.82
46840--47063
104
2.2
104
93
1
378
31
31
19
17
1.95
47390--47453
30
2.2
29
81
10
76
29
28
6
35
1.82
47397--47453
30
1.9
30
85
3
80
29
24
7
38
1.82
53946--53978
11
3.1
11
86
8
50
75
0
6
18
1.00
57634--57786
72
2.1
72
90
2
236
30
29
16
22
1.96
57705--57925
102
2.2
103
90
4
349
32
31
18
17
1.94
65107--65260
71
2.1
72
83
10
190
30
29
18
22
1.97
65187--65390
104
2.0
104
88
7
308
31
30
19
18
1.96

Tables:   1

The End!