Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1618
Parameters: 2 7 7 80 10 50 1000
Length:  43698

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7091--7188
27
3.5
28
90
2
135
26
13
28
31
1.94
7119--7201
27
3.0
27
87
5
96
30
12
25
32
1.92
7091--7202
28
4.0
27
83
6
98
28
12
25
33
1.92
15169--15266
27
3.5
28
90
2
135
26
13
28
31
1.94
15197--15279
27
3.0
27
87
5
96
30
12
25
32
1.92
15169--15280
28
4.0
27
83
6
98
28
12
25
33
1.92
20472--20663
47
4.1
47
90
0
276
32
11
30
25
1.92
20637--20773
46
3.0
46
85
0
184
35
9
29
25
1.88
25904--26031
28
4.5
29
76
9
122
24
28
18
28
1.98
25935--26065
57
2.3
57
82
3
167
24
29
18
28
1.98
32804--32836
3
11.0
3
93
0
57
33
3
0
63
1.10
36702--36926
40
5.7
40
89
3
278
26
26
21
25
2.00

Tables:   1

The End!