Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2009
Parameters: 2 7 7 80 10 50 1000
Length:  46148

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
169--383
76
2.8
74
81
12
236
24
21
25
28
1.99
169--383
38
5.6
38
80
10
208
24
21
25
28
1.99
8295--8516
40
5.6
40
89
1
322
24
21
25
28
1.99
12936--12960
10
2.5
10
100
0
50
20
0
0
80
0.72
23427--23506
31
2.6
30
80
9
74
42
7
15
35
1.75
25511--25690
48
3.8
48
81
4
195
24
28
18
28
1.98
29679--29703
11
2.3
11
100
0
50
16
0
0
84
0.63
33731--33798
29
2.3
29
82
5
84
27
29
13
29
1.94
33905--33972
29
2.3
29
85
5
93
27
30
13
27
1.94
34074--34152
29
2.7
30
78
13
101
29
31
15
24
1.95
33620--34121
174
2.9
174
96
0
923
31
24
14
29
1.94
42009--42075
28
2.3
29
80
7
75
28
28
13
29
1.94
42180--42246
29
2.4
28
82
7
82
28
29
13
28
1.94
41899--42395
171
2.9
173
95
2
903
31
24
14
29
1.94
42348--42426
29
2.7
30
82
13
110
29
30
15
25
1.96

Tables:   1

The End!