Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2823
Parameters: 2 7 7 80 10 50 1000
Length:  26838

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9624--9653
15
2.0
15
93
0
51
30
6
20
43
1.77
12355--12460
38
2.8
38
86
8
139
30
9
3
56
1.49
14596--15011
227
1.8
229
84
3
570
28
22
19
28
1.98
15422--15473
25
2.0
26
88
3
79
26
3
21
48
1.67
15753--15791
15
2.5
16
84
16
55
61
0
2
35
1.10
19085--19252
20
8.6
20
71
13
127
47
5
5
41
1.51
19096--19286
57
3.3
57
87
2
258
46
6
5
41
1.53
19174--19414
94
2.6
90
77
13
258
44
7
5
41
1.56
19325--19431
37
3.1
35
75
22
118
45
11
2
40
1.54
19520--19883
9
43.3
9
64
21
132
45
20
3
31
1.66
19555--19635
16
4.8
16
75
14
72
40
23
0
35
1.55
19741--19879
16
9.0
16
66
19
80
47
19
2
30
1.64
19713--19878
25
6.3
26
72
14
83
47
19
3
29
1.64
19715--19879
41
4.0
41
80
3
172
47
19
3
29
1.64
19800--19891
25
3.7
25
79
5
96
46
17
2
33
1.60
22735--23043
43
7.2
43
86
2
392
19
18
32
29
1.95
23112--23153
22
1.9
22
90
0
66
42
28
19
9
1.82
23759--23807
21
2.3
21
80
16
57
18
10
14
57
1.65

Tables:   1

The End!