Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold211
Parameters: 2 7 7 80 10 50 1000
Length:  49478

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7872--7926
20
2.8
20
85
0
83
38
16
21
23
1.93
8838--8863
9
2.9
9
100
0
52
65
11
11
11
1.48
12007--12051
18
2.5
17
89
7
63
11
15
2
71
1.24
12061--12145
6
13.7
6
72
9
64
5
18
2
72
1.15
12012--12084
18
4.3
18
72
19
50
15
17
0
67
1.24
12029--12097
31
2.4
30
83
9
90
13
18
0
68
1.21
15962--16008
20
2.3
20
81
0
58
23
12
34
29
1.92
19154--19197
20
2.2
20
95
0
79
36
15
22
25
1.94
27519--27550
12
2.7
12
100
0
64
75
6
6
12
1.19
29608--29652
14
3.1
14
87
3
63
73
2
22
2
1.05
29608--29658
14
3.5
15
83
2
61
74
1
21
1
1.02
34050--34086
12
3.0
12
88
7
56
72
13
2
10
1.21
34053--34089
13
2.8
13
91
0
56
75
8
2
13
1.13
34127--34180
14
3.9
14
95
0
99
62
0
12
24
1.30
38870--39102
45
5.2
45
96
0
412
26
20
15
38
1.92

Tables:   1

The End!