Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1578
Parameters: 2 7 7 80 10 50 1000
Length:  17968

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1599--1668
27
2.6
27
95
2
113
31
28
12
27
1.93
1599--1696
28
3.5
28
90
2
135
31
28
13
26
1.94
12166--12235
27
2.6
27
95
2
113
31
28
12
27
1.93
12166--12263
28
3.5
28
90
2
135
31
28
13
26
1.94
14271--14439
46
3.7
45
80
7
196
30
28
20
21
1.98
14278--14451
93
1.9
93
89
2
269
29
29
20
21
1.98
14321--14464
46
3.1
46
71
14
134
29
29
19
21
1.98
15976--16272
9
32.6
9
72
9
163
36
1
14
48
1.52
15940--16137
43
4.7
43
72
16
182
37
0
14
47
1.49
16005--16044
17
2.4
17
86
0
53
37
2
5
55
1.35
15940--16196
123
2.1
123
90
2
408
37
0
14
47
1.50
16099--16263
71
2.3
72
82
3
208
34
1
15
48
1.55
16377--16445
28
2.4
29
90
7
106
53
0
1
44
1.09
16618--16688
24
3.0
24
89
0
115
43
8
18
29
1.79
16736--16868
63
2.1
64
95
1
241
47
3
11
37
1.57
17419--17444
11
2.4
11
100
0
52
65
7
7
19
1.43

Tables:   1

The End!