Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold898
Parameters: 2 7 7 80 10 50 1000
Length:  73249

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7211--7433
40
5.7
40
88
5
271
26
26
21
25
1.99
7211--7433
117
1.9
119
82
7
285
26
26
21
25
1.99
12626--12666
22
1.9
22
95
5
75
9
41
29
19
1.83
15066--15186
44
2.8
43
78
9
120
28
26
19
26
1.98
17753--17777
11
2.3
11
100
0
50
36
0
28
36
1.58
23509--23556
21
2.3
21
85
3
62
43
18
20
16
1.88
23505--23565
10
6.0
10
73
3
50
40
16
24
18
1.90
28354--28400
20
2.4
20
92
3
78
29
8
10
51
1.66
33224--33408
40
4.7
39
88
2
237
24
27
23
24
2.00
33217--33411
79
2.5
80
82
5
252
25
26
23
25
2.00
37676--37833
49
3.2
49
79
7
192
27
18
24
28
1.98
41257--41426
51
3.4
51
80
2
182
30
28
16
24
1.97
41287--41471
50
3.6
50
81
3
174
32
27
15
24
1.95
41342--41471
52
2.6
50
85
4
154
34
28
13
23
1.92
42994--43187
55
3.6
53
76
3
183
20
24
18
37
1.94
62922--63067
27
5.4
27
84
0
184
36
19
19
24
1.94
62922--63067
54
2.7
54
89
0
211
36
19
19
24
1.94
68783--68960
27
6.6
27
84
3
205
29
28
15
26
1.96
68804--68959
82
1.9
81
88
3
233
29
28
15
26
1.96

Tables:   1

The End!