Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold526
Parameters: 2 7 7 80 10 50 1000
Length:  43811

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6753--7014
40
6.6
40
87
3
307
24
20
28
26
1.99
6753--7014
79
3.3
78
85
4
303
24
20
28
26
1.99
6792--7049
79
3.3
79
83
4
218
25
20
28
25
1.99
14694--14956
40
6.6
40
87
3
316
24
20
28
26
1.99
14733--14991
80
3.3
80
84
3
238
25
20
28
25
1.99
21228--21253
12
2.2
12
100
0
52
50
7
0
42
1.31
21701--21799
28
3.5
29
83
9
116
27
15
29
28
1.96
22595--22621
12
2.2
12
100
0
54
29
7
29
33
1.85
25121--25197
22
3.4
22
73
16
68
41
28
5
24
1.76
25128--25192
22
2.8
23
79
6
69
38
29
6
26
1.80
26759--26822
20
3.2
20
82
4
67
32
18
28
20
1.96
26759--26825
30
2.2
30
80
12
75
35
17
26
19
1.94
28421--28475
24
2.3
24
90
0
83
34
34
1
29
1.68
30191--30414
40
5.6
40
85
7
287
24
22
28
24
2.00
30190--30421
119
1.9
119
83
6
299
25
22
28
24
2.00
30190--30447
119
2.2
119
81
6
283
25
21
27
25
1.99
38274--38502
41
5.6
41
82
9
265
24
22
27
24
2.00
38275--38502
81
2.8
82
80
9
263
25
22
28
24
2.00

Tables:   1

The End!