Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1847
Parameters: 2 7 7 80 10 50 1000
Length:  27602

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6523--6548
11
2.4
11
100
0
52
30
19
0
50
1.48
10822--10889
29
2.3
29
85
5
93
27
30
13
27
1.94
10991--11069
29
2.7
30
82
13
110
29
30
15
25
1.96
14070--14137
29
2.3
29
85
5
93
27
30
13
27
1.94
14239--14317
29
2.7
30
84
13
110
29
29
15
26
1.96
15416--15494
39
2.0
39
100
0
158
43
8
25
22
1.82
17763--18428
108
6.2
108
87
2
903
27
22
10
39
1.86
17794--18418
27
23.2
27
84
4
733
27
21
9
40
1.85
18423--18617
27
7.2
27
82
2
230
35
17
19
27
1.94
18423--18618
54
3.6
54
86
2
277
35
17
19
27
1.95
18423--18616
81
2.4
82
84
1
257
35
17
19
27
1.94
18817--18899
27
3.1
26
86
5
94
19
20
21
38
1.93
19211--19283
27
2.7
27
83
6
78
19
24
21
34
1.96
19400--19562
6
26.8
6
74
16
131
21
17
12
48
1.80
19400--19496
30
3.2
30
89
1
149
20
17
14
47
1.82
19403--19557
79
2.0
79
93
0
265
21
18
12
47
1.81
22788--22821
10
3.4
10
100
0
68
26
32
32
8
1.87

Tables:   1

The End!