Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3027
Parameters: 2 7 7 80 10 50 1000
Length:  67396

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1460--1641
40
4.6
39
83
7
199
23
20
27
28
1.99
1460--1641
39
4.6
40
81
8
187
23
20
27
28
1.99
1460--1638
79
2.3
80
84
7
224
23
21
27
27
1.99
9278--9461
40
4.6
40
82
6
196
23
20
27
28
1.99
9278--9458
80
2.3
81
83
9
221
23
20
27
27
1.99
9359--9508
40
3.8
38
80
10
131
25
22
28
24
1.99
13067--13260
49
3.9
48
80
8
192
24
18
28
27
1.98
15308--15340
17
2.0
17
88
5
50
57
18
0
24
1.40
31029--31058
12
2.5
12
94
0
51
23
0
3
73
0.98
32975--33090
28
4.3
27
80
5
135
17
23
21
37
1.93
46129--46183
18
3.2
17
73
19
51
5
32
0
61
1.19
47627--47672
20
2.3
21
82
14
62
26
17
28
28
1.98
47701--47806
28
3.7
27
72
21
81
29
16
27
26
1.97
51455--51907
47
9.6
47
90
1
699
29
29
8
32
1.86
51455--51907
96
4.8
94
90
2
699
29
29
8
32
1.86
51455--51907
143
3.2
143
93
0
739
29
29
8
32
1.86
54505--54695
47
4.1
47
87
0
256
31
10
29
27
1.90
54579--54654
24
3.2
25
62
17
61
27
13
34
25
1.93
54669--54852
98
1.9
96
91
4
298
35
7
26
30
1.83
54668--54852
48
3.8
48
88
5
291
35
7
26
30
1.83
54999--55107
37
2.9
37
93
0
173
23
18
30
27
1.98
56376--56727
40
8.8
40
90
0
542
25
21
26
25
2.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61372--61449
32
2.4
34
79
16
94
26
17
32
23
1.97
64058--64293
59
4.1
56
81
12
275
30
25
14
30
1.95
64076--64293
117
1.9
113
84
11
291
30
24
14
30
1.95

Tables:   1

The End!