Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2888
Parameters: 2 7 7 80 10 50 1000
Length:  37315

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1202--1248
23
2.0
24
83
4
60
70
0
12
17
1.17
10811--10866
28
2.0
27
93
3
94
25
28
16
30
1.96
10838--11016
40
4.5
40
77
8
152
27
27
20
25
1.99
17753--17923
40
4.3
40
90
3
238
28
27
19
23
1.99
17753--17976
80
2.8
80
83
6
242
28
27
20
24
1.99
17756--17976
120
1.8
120
81
7
279
27
27
20
23
1.99
19541--19573
16
2.0
17
94
5
59
42
3
18
36
1.66
23700--23839
27
5.2
27
85
4
185
35
15
20
27
1.93
24577--24684
27
4.0
26
83
5
117
21
23
19
36
1.95
24577--24684
54
2.0
53
83
1
135
21
23
19
36
1.95
24802--24926
6
20.3
6
67
16
51
20
18
12
49
1.78
24805--24868
25
2.6
25
82
0
65
18
23
12
45
1.84
24830--24918
37
2.4
37
81
3
108
21
17
8
51
1.73
24889--24923
18
1.9
18
94
0
61
20
14
8
57
1.63

Tables:   1

The End!