Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3483
Parameters: 2 7 7 80 10 50 1000
Length:  65574

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9884--10042
27
5.9
27
82
4
185
29
28
15
26
1.96
9884--10042
55
2.9
55
82
4
196
29
28
15
26
1.96
9885--10041
82
1.9
81
87
3
226
29
28
15
26
1.96
11979--12022
23
2.0
22
86
4
61
25
22
11
40
1.87
21354--21391
5
7.4
5
88
5
58
15
2
0
81
0.80
21936--21964
3
9.7
3
100
0
58
68
0
31
0
0.89
22405--22495
42
2.1
43
95
4
166
10
24
4
60
1.48
28912--28952
21
2.0
20
86
9
57
41
4
4
48
1.46
29883--29916
5
6.8
5
100
0
68
17
0
0
82
0.67
35034--35149
40
2.9
41
84
7
150
30
20
19
29
1.97
34899--35392
194
2.5
194
78
8
497
31
20
20
28
1.97
35239--35374
40
3.4
40
80
3
103
30
22
19
27
1.98
35281--35374
39
2.4
39
83
3
116
28
24
19
27
1.98
36212--36292
14
5.8
14
74
8
58
41
30
3
23
1.72
36226--36292
21
3.2
20
69
24
50
41
29
4
23
1.74
36813--37095
150
1.9
149
80
9
335
28
16
19
35
1.93
36794--37095
149
2.0
149
80
9
330
29
16
19
34
1.94
36955--37301
189
1.8
189
81
9
440
29
17
18
34
1.94
36749--37569
336
2.4
337
84
3
1058
28
16
19
34
1.94
39744--39857
9
13.0
9
74
10
76
50
18
0
30
1.53
41561--41588
13
2.2
13
100
0
56
28
0
14
57
1.38
43005--43208
40
5.2
40
92
2
333
23
21
27
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56670--56853
79
2.3
81
83
8
227
25
27
22
24
2.00
56651--56853
39
5.1
40
81
9
229
24
27
22
25
2.00
64550--64731
78
2.3
81
83
6
230
24
27
23
24
2.00
64529--64731
40
5.1
40
81
9
229
24
27
22
25
2.00

Tables:   1

The End!