Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold590
Parameters: 2 7 7 80 10 50 1000
Length:  41820

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10103--10131
4
7.5
4
92
7
51
24
0
0
75
0.80
10103--10132
11
2.6
11
94
5
51
26
0
0
73
0.84
15523--15561
17
2.2
18
95
4
71
10
10
2
76
1.10
15537--15593
27
2.2
25
84
6
69
10
5
5
78
1.06
15521--15605
16
5.7
15
70
20
61
15
8
3
72
1.21
15869--15924
24
2.4
23
72
3
58
23
3
32
41
1.71
20610--20649
18
2.2
18
86
4
53
12
27
0
60
1.33
28131--28183
15
3.4
15
81
5
61
22
11
5
60
1.52
28131--28187
17
3.5
17
90
9
91
22
12
5
59
1.53
28229--28258
12
2.5
12
100
0
60
13
0
6
80
0.91
30182--30240
26
2.3
26
100
0
118
25
33
11
28
1.91
31859--31912
28
1.9
28
85
7
74
11
18
9
61
1.55
34088--34131
21
2.1
21
91
0
70
29
38
2
29
1.69
35059--35092
15
2.3
15
89
0
50
35
29
32
2
1.73
38781--38833
21
2.5
21
90
3
79
33
33
1
30
1.69

Tables:   1

The End!