Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1108
Parameters: 2 7 7 80 10 50 1000
Length:  33805

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
647--737
46
2.0
47
89
4
141
24
18
20
36
1.95
1049--1096
12
4.0
12
86
8
71
72
8
8
10
1.27
1134--1185
14
3.9
14
82
14
74
65
0
11
23
1.25
1134--1184
25
2.0
26
92
3
86
64
0
11
23
1.26
2251--2291
17
2.5
17
80
11
50
56
2
31
9
1.45
4966--5059
46
2.0
46
91
4
154
24
19
21
35
1.96
9207--9253
23
2.1
23
84
7
62
51
12
4
31
1.59
14533--14574
15
2.6
16
88
7
59
23
11
2
61
1.42
14611--14642
12
2.7
12
100
0
64
12
0
6
81
0.87
16290--16361
20
3.7
20
79
1
83
26
26
15
31
1.95
18141--18178
12
2.9
13
85
11
51
71
5
5
18
1.25
18142--18176
14
2.6
13
90
4
52
77
5
2
14
1.07
19701--19730
16
1.9
15
93
6
51
20
3
33
43
1.68
20619--20673
20
2.8
20
88
0
83
25
29
16
29
1.97
24735--24779
12
3.7
13
82
17
69
15
8
6
68
1.36

Tables:   1

The End!