Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1834
Parameters: 2 7 7 80 10 50 1000
Length:  30690

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5411--5488
24
3.2
24
94
5
138
32
5
25
37
1.78
8159--8246
43
2.0
44
97
2
169
45
6
23
23
1.77
8339--8446
26
4.2
26
93
0
180
33
7
22
37
1.82
11064--11093
14
2.1
14
100
0
60
33
6
0
60
1.23
11114--11232
64
2.0
57
80
14
132
36
5
5
52
1.48
11074--11157
23
3.3
23
71
17
53
34
8
4
52
1.53
11445--11483
18
2.1
19
85
4
53
38
48
0
12
1.42
12033--12074
18
2.5
17
84
7
50
11
35
47
4
1.61
12577--12656
3
27.0
3
80
9
85
33
1
2
62
1.16
12602--12660
19
3.2
19
92
2
93
35
0
5
59
1.20
12883--12928
21
2.2
21
84
7
58
30
0
4
65
1.12
13107--13145
20
2.0
20
94
0
69
33
0
7
58
1.26
13107--13216
9
11.8
9
67
17
55
35
3
6
54
1.43
13197--13244
21
2.3
21
76
20
55
35
4
8
52
1.51
13411--13477
27
2.4
28
82
9
84
31
11
5
50
1.63
13411--13489
27
3.1
25
78
10
81
31
12
5
50
1.62
25683--25879
102
2.0
99
82
8
238
23
16
18
41
1.90
25808--25951
72
2.0
72
86
5
202
23
18
22
35
1.96
25612--26483
174
5.0
174
92
2
1309
24
16
20
38
1.92
25933--25959
14
1.9
14
100
0
54
22
14
11
51
1.73
25982--26125
72
2.0
72
85
5
193
24
18
22
35
1.95
26107--26133
14
1.9
14
100
0
54
22
14
11
51
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26156--26299
72
2.0
72
87
2
209
23
17
22
36
1.95
26281--26307
14
1.9
14
100
0
54
22
14
11
51
1.73

Tables:   1

The End!