Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1992
Parameters: 2 7 7 80 10 50 1000
Length:  39291

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5131--5212
7
11.9
7
82
2
94
32
0
36
30
1.58
19971--20005
16
2.1
18
89
10
56
42
0
0
57
0.99
22798--22959
72
2.2
72
86
4
245
33
24
11
30
1.91
22803--22997
72
2.7
72
80
3
178
30
24
13
31
1.93
28968--29008
16
2.5
17
84
11
50
29
2
2
65
1.18
30038--30086
24
2.0
24
96
0
89
30
26
24
18
1.98
31279--31423
10
15.0
9
69
14
60
59
2
4
34
1.28
31300--31368
31
2.3
31
87
5
97
56
1
2
39
1.23
31300--31368
30
2.3
29
85
7
93
56
1
2
39
1.23
32042--32117
40
1.9
40
86
0
107
35
22
21
21
1.96
32064--32147
40
2.1
40
82
6
100
33
25
22
19
1.97
32241--32491
41
6.1
41
91
0
378
21
23
27
27
1.99
32930--32979
13
3.7
13
80
20
50
16
0
46
38
1.47
33034--33086
20
2.6
21
87
6
81
11
0
56
32
1.35
33021--33086
7
9.6
7
83
3
80
13
0
53
33
1.41

Tables:   1

The End!