Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2762
Parameters: 2 7 7 80 10 50 1000
Length:  30594

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8666--8851
40
4.7
40
81
10
202
27
27
20
23
1.99
13747--13855
6
17.5
6
70
22
66
75
5
3
15
1.13
13747--13848
10
8.8
11
72
20
75
75
4
3
15
1.12
13784--13855
17
4.1
18
75
19
64
77
4
4
13
1.06
14044--15253
605
2.0
601
93
1
2073
27
20
23
27
1.99
17129--17323
48
4.1
48
88
1
266
33
27
16
21
1.95
17489--17678
95
2.0
94
91
1
308
35
22
13
29
1.92
19500--19624
48
2.7
47
85
7
157
32
22
24
21
1.98
19500--19710
94
2.2
94
83
3
246
32
20
24
22
1.98
19544--19711
48
3.5
48
73
4
162
32
20
24
22
1.98
19730--19853
49
2.5
49
79
8
137
29
19
24
26
1.98
23493--23562
27
2.6
27
95
2
113
31
28
12
27
1.93
23493--23590
28
3.5
28
90
2
135
31
28
13
26
1.94

Tables:   1

The End!