Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1332
Parameters: 2 7 7 80 10 50 1000
Length:  38493

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108--310
40
5.1
40
86
9
272
26
27
22
24
2.00
39--351
39
7.8
40
79
11
293
26
26
22
23
2.00
108--310
79
2.5
84
85
9
289
26
27
22
24
2.00
39--351
79
3.9
79
78
10
280
26
26
22
23
2.00
214--389
40
4.5
41
84
9
154
23
28
22
24
1.99
2834--2867
18
1.9
17
88
5
50
35
29
5
29
1.81
2646--3099
48
9.7
48
83
10
534
29
29
7
33
1.86
2656--3099
141
3.2
140
87
8
584
29
29
8
33
1.86
2656--3133
95
5.1
95
76
15
340
29
29
7
33
1.85
4540--4659
56
2.1
56
100
0
240
22
24
9
44
1.82
5568--5603
14
2.6
14
95
4
65
27
0
19
52
1.46
13362--13478
42
2.7
43
83
6
123
23
17
27
30
1.97
17287--17340
24
2.2
24
84
12
67
29
37
16
16
1.91
23575--23700
29
4.4
29
86
3
159
34
24
11
29
1.91
23575--23700
57
2.2
57
87
2
173
34
24
11
29
1.91
28466--28519
24
2.2
24
84
12
67
29
37
16
16
1.91
36351--36404
24
2.2
24
84
12
67
29
37
16
16
1.91

Tables:   1

The End!