Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3522
Parameters: 2 7 7 80 10 50 1000
Length:  33136

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7872--8017
40
3.7
40
90
3
206
26
28
22
23
1.99
11568--11635
27
2.5
29
75
18
74
48
5
8
36
1.59
11964--12026
28
2.4
25
75
17
63
60
4
1
33
1.27
12045--12152
52
2.1
50
83
10
130
62
4
1
31
1.26
12073--12152
32
2.4
34
82
12
94
65
5
1
28
1.22
12046--12152
18
6.3
16
72
16
81
61
4
1
31
1.27
12073--12152
16
4.8
17
77
13
78
65
5
1
28
1.22
12181--12221
7
6.0
7
94
5
75
85
0
0
14
0.60
12181--12217
13
2.8
13
95
4
65
86
0
0
13
0.57
12181--12221
20
2.0
20
100
0
82
85
0
0
14
0.60
12410--12466
25
2.3
23
75
18
62
59
3
0
36
1.14
12437--12469
15
2.3
15
90
10
52
60
0
0
39
0.97
12412--12469
23
2.4
25
83
13
70
58
3
0
37
1.15
12690--12793
3
34.0
3
70
14
61
59
4
3
31
1.36
13410--13469
15
3.6
17
78
17
56
21
0
5
73
1.02
13410--13473
32
2.0
30
82
11
74
23
0
4
71
1.04
13426--13475
17
3.1
17
76
23
54
26
0
8
66
1.19
13479--13521
22
1.9
22
85
4
59
69
6
9
13
1.35
14068--14115
25
1.9
25
82
0
60
29
10
29
31
1.90
14434--14488
21
2.6
21
88
0
83
21
34
16
27
1.95
14571--14909
88
3.8
86
79
9
317
36
18
16
28
1.93
14909--14958
14
3.6
14
91
0
82
54
6
18
22
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14823--15025
104
2.0
103
90
1
316
37
17
17
27
1.92
14937--15102
75
2.2
75
93
0
278
34
19
16
28
1.94
27984--28169
39
4.7
39
82
10
216
25
22
26
24
2.00

Tables:   1

The End!