Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3489
Parameters: 2 7 7 80 10 50 1000
Length:  27794

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2050--2110
29
2.1
28
90
3
95
27
31
13
27
1.94
4268--4398
47
2.8
47
80
13
153
23
29
19
27
1.99
5289--5313
9
2.8
9
100
0
50
68
20
0
12
1.21
10729--10899
46
3.7
46
82
6
202
22
30
19
27
1.98
10729--10902
94
1.9
91
84
9
235
22
30
19
27
1.98
11339--11396
30
1.9
30
100
0
116
32
10
13
43
1.78
14163--14394
40
5.8
40
90
3
326
26
28
21
23
1.99
23253--23306
24
2.3
23
84
6
72
50
20
18
11
1.77
23529--23613
29
2.9
29
83
0
107
29
16
25
28
1.97
23527--23637
58
1.9
57
83
5
143
28
16
27
27
1.97

Tables:   1

The End!