Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1562
Parameters: 2 7 7 80 10 50 1000
Length:  35282

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92--147
26
2.1
27
87
12
80
37
3
17
41
1.67
1822--1850
15
1.9
15
100
0
58
13
17
13
55
1.70
4234--4410
46
3.8
46
77
6
198
22
20
28
29
1.98
4232--4401
93
1.8
92
93
3
297
21
20
29
28
1.98
7154--7189
17
2.1
18
89
5
56
16
25
36
22
1.94
7416--7477
27
2.3
27
82
0
79
48
29
0
22
1.51
7459--7517
27
2.2
26
81
3
64
44
18
13
23
1.86
8002--8073
31
2.3
31
90
4
110
23
19
23
33
1.97
22697--22818
43
2.8
44
81
7
144
27
14
26
31
1.95
30390--30528
43
3.3
42
83
8
174
28
17
25
28
1.97
32472--32649
27
6.6
27
85
3
133
29
28
14
26
1.95
32472--32648
54
3.3
54
83
5
214
29
28
14
26
1.95
32493--32648
81
1.9
82
88
3
235
29
28
14
26
1.95

Tables:   1

The End!