Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3285
Parameters: 2 7 7 80 10 50 1000
Length:  42576

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5661--5710
17
2.7
20
78
18
70
10
0
44
46
1.37
9965--9999
8
4.2
8
85
7
52
20
2
0
77
0.90
9965--9999
17
2.1
18
89
10
56
20
2
0
77
0.90
10134--10185
19
2.7
20
84
3
70
55
1
0
42
1.10
18077--18152
31
2.5
30
86
2
107
34
13
14
38
1.85
19310--19358
22
2.3
22
85
3
64
71
0
14
14
1.15
19934--19975
9
4.6
9
82
5
57
7
9
2
80
0.97
19931--19975
19
2.4
19
82
10
58
6
8
2
82
0.93
20011--20040
14
2.1
14
93
0
51
20
3
0
76
0.92
20062--20124
22
2.7
23
78
7
74
39
0
4
55
1.21
20115--20155
19
2.2
18
86
8
55
36
2
2
58
1.24
20136--20169
12
2.9
12
95
4
61
35
0
0
64
0.94
20092--20180
30
2.8
31
88
10
126
37
1
1
60
1.11
20157--20198
19
2.1
21
86
8
61
42
0
0
57
0.99
20092--20183
31
2.9
31
85
11
123
38
1
1
59
1.12
20238--20338
51
2.0
51
84
11
136
37
0
1
59
1.15
20403--20445
20
2.2
20
87
4
61
39
6
0
53
1.28
20490--20533
20
2.1
21
91
4
72
54
2
0
43
1.12
20476--20630
44
3.7
41
73
18
117
51
1
1
45
1.20
20590--20633
21
2.0
22
91
4
72
52
0
0
47
1.00
22846--22920
27
2.8
26
78
4
87
26
28
24
21
1.99
24683--24717
17
2.0
18
94
5
63
42
0
11
45
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24935--24997
24
2.6
25
76
16
71
50
0
3
46
1.17
25616--25657
21
2.0
21
100
0
84
28
14
28
28
1.95
27962--28019
20
2.9
20
84
0
71
13
29
34
22
1.93
32557--32614
30
1.9
30
89
0
89
41
3
24
31
1.71
32826--32857
13
2.5
13
94
0
55
31
0
12
56
1.37
32952--33193
50
4.7
50
86
4
297
26
24
29
19
1.99
32952--33201
100
2.4
103
88
6
364
26
24
29
20
1.99
40575--40813
49
4.7
49
81
6
230
19
28
24
27
1.99
40575--40813
104
2.3
100
85
9
306
19
28
24
27
1.99
40907--40938
13
2.5
13
94
0
55
56
12
0
31
1.37

Tables:   1

The End!