Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1551
Parameters: 2 7 7 80 10 50 1000
Length:  61723

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3223--3279
24
2.4
24
93
0
96
43
22
10
22
1.84
5340--5384
22
2.0
24
86
8
67
31
15
4
48
1.65
8506--8675
46
3.7
46
75
13
168
22
21
27
28
1.99
8503--8673
93
1.8
93
91
0
279
22
21
27
28
1.99
16070--16099
12
2.4
13
94
5
53
63
0
0
36
0.95
16072--16137
20
3.2
20
69
26
57
62
3
4
30
1.30
16550--16632
38
2.2
38
95
0
148
22
12
48
16
1.80
16587--16611
13
1.9
13
100
0
50
24
16
44
16
1.86
16676--16700
12
2.1
12
100
0
50
16
8
36
40
1.77
17024--17088
21
3.1
21
62
4
51
24
21
23
30
1.99
17136--17461
44
7.5
44
67
10
186
19
22
20
37
1.95
17135--17477
87
4.0
87
88
1
440
20
21
20
37
1.95
17579--17733
44
3.6
42
75
9
132
21
18
21
37
1.94
17618--17790
88
2.0
86
88
2
256
20
21
21
36
1.95
17620--17781
44
3.7
43
73
13
136
19
21
21
37
1.95
25773--25819
19
2.5
19
86
6
60
42
8
19
29
1.80
28627--28706
12
6.6
12
75
12
74
65
2
3
28
1.23
28665--28713
8
5.7
9
75
15
50
73
0
2
24
0.94
29125--29197
13
5.7
13
75
3
76
19
15
50
15
1.78
33477--33586
26
4.2
26
96
0
175
34
5
24
35
1.79
35206--35318
27
4.2
27
85
3
129
16
23
23
36
1.94
35205--35318
54
2.1
54
88
3
167
16
23
22
36
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44519--44577
15
3.8
15
71
20
50
61
3
3
32
1.29
44521--44550
12
2.4
13
94
5
53
63
0
0
36
0.95
45007--45066
13
4.7
13
68
4
50
20
15
50
15
1.79
45005--45087
38
2.2
38
97
0
157
21
12
49
16
1.78
45132--45156
12
2.1
12
100
0
50
16
8
36
40
1.77
45480--45544
21
3.1
21
62
4
51
24
21
23
30
1.99
45592--45922
44
7.6
44
68
16
186
19
22
20
37
1.94
45591--45935
87
4.0
87
89
1
458
20
22
20
37
1.95
46078--46232
44
3.5
43
73
6
132
18
21
21
37
1.94
46076--46248
88
2.0
86
87
4
249
20
21
21
36
1.95
54235--54281
19
2.5
19
86
6
60
42
8
19
29
1.80
57579--57651
13
5.7
13
75
3
76
19
15
50
15
1.78

Tables:   1

The End!