Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold576
Parameters: 2 7 7 80 10 50 1000
Length:  31205

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5213--5282
28
2.6
27
86
2
86
28
20
28
22
1.98
5158--5309
55
2.8
53
81
4
178
28
16
28
26
1.97
5159--5314
27
5.7
27
78
6
145
27
16
28
27
1.97
16670--16733
31
2.1
31
90
0
101
21
23
15
39
1.92
16947--16999
25
2.1
24
89
6
79
26
18
18
35
1.95
17057--17113
9
5.9
9
76
15
60
36
21
7
35
1.80
17053--17115
20
3.2
20
93
0
108
33
19
11
36
1.87
17064--17115
11
5.1
11
73
17
58
34
19
9
36
1.84
22196--22447
40
6.3
40
81
6
271
23
19
28
28
1.99
22196--22447
120
2.1
120
89
2
391
23
19
28
28
1.99
22196--22427
80
2.9
80
86
3
315
24
20
28
27
1.99

Tables:   1

The End!