Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2671
Parameters: 2 7 7 80 10 50 1000
Length:  41608

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2754--3059
40
7.7
40
90
1
456
25
28
21
24
1.99
2741--3059
120
2.7
118
92
1
505
25
28
21
24
1.99
3113--3187
38
2.0
38
86
5
107
24
26
18
30
1.98
5641--5716
22
3.3
22
66
16
64
26
30
10
32
1.90
5615--5869
47
5.4
47
92
1
384
27
30
8
33
1.86
9216--9532
39
8.1
39
90
1
447
26
28
20
24
1.99
9229--9532
79
3.9
78
90
3
448
25
27
21
25
1.99
9586--9660
38
2.0
38
86
5
107
24
26
18
30
1.98
12087--12390
47
6.4
47
91
1
437
27
29
8
34
1.86
15122--15315
40
4.8
40
80
5
196
24
20
28
26
1.99
15179--15341
79
2.1
79
82
6
197
25
19
28
26
1.99
24721--24887
48
3.5
48
74
11
153
35
28
17
17
1.94
28410--28600
39
4.8
40
92
2
289
23
21
30
24
1.99
28407--28600
79
2.5
79
88
4
293
23
21
29
24
1.99
36507--36683
77
2.3
78
87
5
245
21
22
29
25
1.99
36507--36704
39
5.1
40
81
13
227
22
22
29
25
1.99
39056--39155
40
2.4
44
76
18
108
26
16
27
31
1.96

Tables:   1

The End!