Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1855
Parameters: 2 7 7 80 10 50 1000
Length:  36888

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9803--9840
12
3.2
12
96
3
69
15
0
7
76
1.01
9803--9840
11
3.4
11
92
7
67
15
0
7
76
1.01
13840--13899
29
2.1
29
90
0
93
41
28
0
30
1.56
13846--13893
15
3.3
15
73
5
53
43
25
0
31
1.55
14801--14897
30
3.2
30
71
8
90
27
15
28
27
1.96
17007--17089
30
2.7
30
78
9
80
14
20
1
63
1.36
17043--17095
18
2.9
18
77
2
52
9
18
3
67
1.33
17065--17089
12
2.1
12
100
0
50
8
16
0
76
1.02
17158--17220
5
12.0
5
78
18
58
1
17
1
79
0.89
17158--17216
16
3.7
15
78
17
57
1
16
1
79
0.89
17171--17220
6
8.2
6
83
16
59
0
18
2
80
0.82
17160--17220
21
2.8
21
87
5
86
1
16
1
80
0.88
17162--17220
31
1.9
30
83
13
75
1
16
1
79
0.89
18131--18188
13
4.5
13
80
8
73
17
5
5
72
1.22
18131--18187
12
4.5
12
78
10
60
17
5
5
71
1.23
19897--19979
30
2.8
30
69
7
78
25
18
28
27
1.98
20709--20753
14
3.3
14
78
6
56
35
0
15
48
1.45
21728--21787
29
2.1
29
90
0
93
43
28
0
28
1.55
21741--21785
14
3.1
14
75
6
54
42
31
0
26
1.56
22030--22064
17
1.9
19
88
11
56
68
11
5
14
1.37
23112--23161
18
2.8
18
87
0
73
58
0
28
14
1.37
23108--23186
24
3.3
24
80
0
86
59
0
27
12
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27309--27353
14
3.3
14
78
6
56
35
0
15
48
1.45
28325--28384
29
2.1
29
93
0
102
41
30
0
28
1.56
28331--28378
15
3.3
15
73
5
53
43
27
0
29
1.55
30386--30432
20
2.3
20
81
0
58
29
34
12
23
1.92
31826--31861
11
3.3
11
92
0
54
75
5
5
13
1.17

Tables:   1

The End!