Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold417
Parameters: 2 7 7 80 10 50 1000
Length:  17156

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2058--2504
47
9.6
47
91
4
703
33
8
29
28
1.87
2170--2242
22
3.3
22
67
14
69
30
10
30
28
1.91
2261--2335
22
3.3
22
63
7
60
30
10
30
28
1.90
2058--2489
140
3.1
140
90
5
671
32
8
29
28
1.87
2622--2699
37
2.1
36
88
2
111
24
19
32
24
1.98
4434--4536
43
2.4
43
100
0
206
22
15
35
26
1.94
4518--4591
29
2.6
29
89
4
105
25
16
32
25
1.96
4901--5077
38
4.6
37
80
8
135
25
23
27
23
2.00
5015--5161
38
3.8
38
86
9
192
24
22
27
25
2.00
5015--5166
79
2.0
76
84
8
200
24
21
28
25
1.99
8409--8796
46
8.4
47
92
4
616
32
8
30
28
1.87
8409--8796
91
4.2
93
91
5
619
32
8
30
28
1.87
8915--8992
36
2.1
36
88
2
111
24
17
32
25
1.97
12062--12140
37
2.1
37
86
4
106
24
32
18
24
1.97
12262--12664
47
8.6
47
82
12
451
28
29
8
33
1.86
12262--12664
95
4.3
95
82
12
471
28
29
8
33
1.86
12261--12664
185
2.2
185
84
10
511
28
29
8
33
1.86
12262--12653
138
2.8
137
84
10
485
28
29
8
33
1.86
15685--15732
23
2.0
24
88
4
71
31
33
8
27
1.86
15896--16051
78
2.0
80
84
3
208
25
28
23
23
1.99
15896--16051
40
3.9
40
88
2
208
25
28
23
23
1.99
16482--16548
29
2.3
29
87
5
91
26
28
13
31
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16534--16634
43
2.4
42
93
6
170
27
35
13
22
1.92

Tables:   1

The End!