Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1696
Parameters: 2 7 7 80 10 50 1000
Length:  35861

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2400--2450
24
2.1
24
89
7
77
27
19
19
33
1.96
2498--2558
21
2.9
21
82
4
79
32
18
11
37
1.86
2484--2558
10
7.1
11
73
7
57
33
16
13
37
1.87
4883--5038
47
3.3
46
78
9
172
28
19
27
24
1.98
4880--5052
94
1.8
94
87
4
260
27
19
27
24
1.99
4883--5100
94
2.3
93
81
10
239
27
18
28
24
1.98
6733--6903
43
4.0
42
76
9
150
24
18
28
28
1.98
12572--12601
14
2.1
14
93
0
51
23
6
23
46
1.75
17771--17831
30
2.0
30
83
0
77
31
22
8
37
1.84
19765--19813
19
2.6
19
96
0
89
16
20
42
20
1.89
19947--19983
15
2.5
15
95
0
65
37
32
13
16
1.87
22152--22201
25
2.0
25
96
0
91
42
26
12
20
1.86
24874--24925
25
2.1
25
89
3
79
26
17
21
34
1.95
24976--25033
21
2.8
21
84
5
73
31
18
12
37
1.88
24981--25033
11
5.0
11
75
6
56
30
18
13
37
1.89
27358--27575
47
4.7
44
74
14
131
29
17
28
24
1.97
28380--28441
31
2.0
31
100
0
124
41
9
22
25
1.84
28589--28627
15
2.6
15
100
0
78
12
0
30
56
1.37
29194--29362
43
4.0
42
79
11
166
24
17
28
29
1.97

Tables:   1

The End!