Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1969
Parameters: 2 7 7 80 10 50 1000
Length:  23840

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--6560
295
22.3
295
97
1
12401
27
20
20
32
1.97
7586--7735
43
3.5
42
75
13
128
32
22
20
25
1.98
9816--9944
44
3.0
44
78
7
122
34
24
16
24
1.95
9785--9939
42
3.6
43
73
7
127
32
25
16
25
1.96
13557--13620
31
2.1
31
90
0
101
25
23
15
35
1.94
13833--13979
24
6.2
24
87
3
199
27
20
21
30
1.98
13839--13976
71
1.9
71
91
0
222
28
21
23
27
1.99
13833--13979
47
3.1
47
86
4
197
27
20
21
30
1.98
14029--14095
20
3.3
20
93
0
116
32
20
11
34
1.90
14029--14084
11
5.5
11
71
16
57
32
19
12
35
1.89
14132--14179
25
1.9
25
86
0
69
27
14
22
35
1.93
21639--21701
30
2.1
31
90
3
101
23
23
15
36
1.94
21895--21989
24
4.0
24
86
6
131
27
22
21
29
1.99
21894--21989
47
2.0
49
88
8
144
27
21
20
30
1.98
21916--21988
23
3.1
23
92
2
119
28
20
20
30
1.98
22038--22076
20
2.0
20
100
0
78
30
20
12
35
1.90
22039--22083
20
2.2
20
92
0
72
31
22
13
33
1.92
22120--22167
25
1.9
25
86
0
69
25
16
25
33
1.96

Tables:   1

The End!